Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.28■□□□□ 0.52
USP8P40818 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.28■□□□□ 0.52
USP8P40818 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.28■□□□□ 0.52
USP8P40818 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 AC025062.2-201ENST00000605477 670 ntBASIC18.28■□□□□ 0.52
USP8P40818 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.28■□□□□ 0.52
USP8P40818 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP8P40818 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.28■□□□□ 0.52
USP8P40818 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.28■□□□□ 0.52
USP8P40818 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
USP8P40818 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
USP8P40818 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP8P40818 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 TUBB8P12-201ENST00000308911 1335 ntBASIC18.27■□□□□ 0.52
USP8P40818 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 TUBB7P-202ENST00000428444 1305 ntBASIC18.27■□□□□ 0.52
USP8P40818 TUBB8P7-204ENST00000567960 1332 ntBASIC18.27■□□□□ 0.52
USP8P40818 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.27■□□□□ 0.52
USP8P40818 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.27■□□□□ 0.52
USP8P40818 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
USP8P40818 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.27■□□□□ 0.52
USP8P40818 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.27■□□□□ 0.52
USP8P40818 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.27■□□□□ 0.52
USP8P40818 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP8P40818 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.27■□□□□ 0.52
USP8P40818 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP8P40818 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
USP8P40818 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.51
USP8P40818 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP8P40818 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.27■□□□□ 0.51
USP8P40818 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.26■□□□□ 0.51
USP8P40818 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.26■□□□□ 0.51
USP8P40818 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP8P40818 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP8P40818 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.26■□□□□ 0.51
USP8P40818 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
USP8P40818 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.26■□□□□ 0.51
USP8P40818 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.26■□□□□ 0.51
USP8P40818 RPS2P1-201ENST00000434010 821 ntBASIC18.26■□□□□ 0.51
USP8P40818 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms