Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.97■□□□□ 0.95
COL15A1P39059 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL15A1P39059 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 AC060834.1-201ENST00000443027 2032 ntBASIC20.97■□□□□ 0.95
COL15A1P39059 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.97■□□□□ 0.95
COL15A1P39059 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.97■□□□□ 0.95
COL15A1P39059 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
COL15A1P39059 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COL15A1P39059 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL15A1P39059 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 AC092068.3-201ENST00000587894 2016 ntBASIC20.96■□□□□ 0.95
COL15A1P39059 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.96■□□□□ 0.95
COL15A1P39059 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
COL15A1P39059 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 AL353779.1-201ENST00000434793 351 ntBASIC20.96■□□□□ 0.95
COL15A1P39059 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.96■□□□□ 0.95
COL15A1P39059 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.96■□□□□ 0.95
COL15A1P39059 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
COL15A1P39059 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL15A1P39059 AL512361.1-201ENST00000554200 418 ntBASIC20.96■□□□□ 0.95
COL15A1P39059 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.96■□□□□ 0.95
COL15A1P39059 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.96■□□□□ 0.95
COL15A1P39059 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
COL15A1P39059 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL15A1P39059 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL15A1P39059 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
COL15A1P39059 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
COL15A1P39059 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.95■□□□□ 0.94
COL15A1P39059 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 HLA-V-201ENST00000429037 534 ntBASIC20.95■□□□□ 0.94
COL15A1P39059 DFFBP1-201ENST00000433250 979 ntBASIC20.95■□□□□ 0.94
COL15A1P39059 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.95■□□□□ 0.94
COL15A1P39059 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.95■□□□□ 0.94
COL15A1P39059 GNAQP1-201ENST00000444815 1067 ntBASIC20.95■□□□□ 0.94
COL15A1P39059 AP002490.2-201ENST00000524791 560 ntBASIC20.95■□□□□ 0.94
COL15A1P39059 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.95■□□□□ 0.94
COL15A1P39059 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.95■□□□□ 0.94
COL15A1P39059 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.95■□□□□ 0.94
COL15A1P39059 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL15A1P39059 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 BTBD7P1-201ENST00000447253 1453 ntBASIC20.94■□□□□ 0.94
COL15A1P39059 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL15A1P39059 AP001094.4-201ENST00000579008 2176 ntBASIC20.94■□□□□ 0.94
COL15A1P39059 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL15A1P39059 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
COL15A1P39059 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL15A1P39059 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COL15A1P39059 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.94■□□□□ 0.94
COL15A1P39059 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL15A1P39059 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.94■□□□□ 0.94
COL15A1P39059 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.94■□□□□ 0.94
COL15A1P39059 GPR53P-205ENST00000457298 1084 ntBASIC20.94■□□□□ 0.94
COL15A1P39059 SPDYE18-201ENST00000510091 1050 ntBASIC20.94■□□□□ 0.94
COL15A1P39059 IGHV3-71-201ENST00000523324 359 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms