Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.64■□□□□ 0.41
RFC1P35251 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RFC1P35251 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFC1P35251 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
RFC1P35251 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.63■□□□□ 0.41
RFC1P35251 HLA-J-202ENST00000469281 1241 ntBASIC17.63■□□□□ 0.41
RFC1P35251 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.63■□□□□ 0.41
RFC1P35251 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.63■□□□□ 0.41
RFC1P35251 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RFC1P35251 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
RFC1P35251 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFC1P35251 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
RFC1P35251 ALOX12P2-203ENST00000570921 1945 ntBASIC17.62■□□□□ 0.41
RFC1P35251 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 AL662844.4-201ENST00000606367 2838 ntBASIC17.62■□□□□ 0.41
RFC1P35251 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
RFC1P35251 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 PRSS29P-201ENST00000440800 595 ntBASIC17.62■□□□□ 0.41
RFC1P35251 FAM185BP-201ENST00000443595 716 ntBASIC17.62■□□□□ 0.41
RFC1P35251 FDX1P1-201ENST00000449115 551 ntBASIC17.62■□□□□ 0.41
RFC1P35251 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.62■□□□□ 0.41
RFC1P35251 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 AC005412.3-201ENST00000580309 715 ntBASIC17.62■□□□□ 0.41
RFC1P35251 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 ACTL9-202ENST00000612068 1252 ntBASIC17.62■□□□□ 0.41
RFC1P35251 AC010654.1-201ENST00000615722 808 ntBASIC17.62■□□□□ 0.41
RFC1P35251 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.62■□□□□ 0.41
RFC1P35251 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFC1P35251 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFC1P35251 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.61■□□□□ 0.41
RFC1P35251 AL512652.2-201ENST00000625156 1716 ntBASIC17.61■□□□□ 0.41
RFC1P35251 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.61■□□□□ 0.41
RFC1P35251 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFC1P35251 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms