Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD40P25942 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.39□□□□□ -0.11
CD40P25942 FAM58DP-201ENST00000428076 619 ntBASIC14.39□□□□□ -0.11
CD40P25942 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CD40P25942 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.39□□□□□ -0.11
CD40P25942 AC027307.2-201ENST00000591252 911 ntBASIC14.39□□□□□ -0.11
CD40P25942 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.39□□□□□ -0.11
CD40P25942 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.39□□□□□ -0.11
CD40P25942 AL671710.1-201ENST00000610245 2349 ntBASIC14.39□□□□□ -0.11
CD40P25942 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD40P25942 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 AL391256.1-201ENST00000443260 1855 ntBASIC14.39□□□□□ -0.11
CD40P25942 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 KRT8P39-201ENST00000396270 1433 ntBASIC14.39□□□□□ -0.11
CD40P25942 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD40P25942 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD40P25942 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD40P25942 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CD40P25942 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.38□□□□□ -0.11
CD40P25942 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.38□□□□□ -0.11
CD40P25942 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.38□□□□□ -0.11
CD40P25942 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 AC084121.4-201ENST00000641598 221 ntBASIC14.38□□□□□ -0.11
CD40P25942 AF228730.8-201ENST00000642140 221 ntBASIC14.38□□□□□ -0.11
CD40P25942 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.38□□□□□ -0.11
CD40P25942 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.38□□□□□ -0.11
CD40P25942 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD40P25942 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
CD40P25942 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD40P25942 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.38□□□□□ -0.11
CD40P25942 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CD40P25942 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 RBPMS2P1-201ENST00000437762 623 ntBASIC14.37□□□□□ -0.11
CD40P25942 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.37□□□□□ -0.11
CD40P25942 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.37□□□□□ -0.11
CD40P25942 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.37□□□□□ -0.11
CD40P25942 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CD40P25942 AL139011.1-202ENST00000642063 584 ntBASIC14.37□□□□□ -0.11
CD40P25942 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD40P25942 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms