Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL596442.2-201ENST00000610240 980 ntBASIC16.87■□□□□ 0.29
XPAP23025 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.87■□□□□ 0.29
XPAP23025 AL161645.1-201ENST00000622716 1255 ntBASIC16.87■□□□□ 0.29
XPAP23025 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.87■□□□□ 0.29
XPAP23025 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
XPAP23025 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XPAP23025 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
XPAP23025 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
XPAP23025 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
XPAP23025 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 YBX1P5-201ENST00000509441 847 ntBASIC16.86■□□□□ 0.29
XPAP23025 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.86■□□□□ 0.29
XPAP23025 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
XPAP23025 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
XPAP23025 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.86■□□□□ 0.29
XPAP23025 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
XPAP23025 AC060834.1-201ENST00000443027 2032 ntBASIC16.86■□□□□ 0.29
XPAP23025 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
XPAP23025 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.85■□□□□ 0.29
XPAP23025 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 AC092902.6-201ENST00000641783 218 ntBASIC16.85■□□□□ 0.29
XPAP23025 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.85■□□□□ 0.29
XPAP23025 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
XPAP23025 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.85■□□□□ 0.29
XPAP23025 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XPAP23025 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XPAP23025 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XPAP23025 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
XPAP23025 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.84■□□□□ 0.29
XPAP23025 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 AL671277.1-201ENST00000429656 993 ntBASIC16.84■□□□□ 0.29
XPAP23025 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 FAM86C2P-203ENST00000528684 1004 ntBASIC16.84■□□□□ 0.29
XPAP23025 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.84■□□□□ 0.29
XPAP23025 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
XPAP23025 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 AL009183.1-201ENST00000603760 355 ntBASIC16.84■□□□□ 0.29
XPAP23025 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.84■□□□□ 0.29
XPAP23025 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XPAP23025 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms