Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.73□□□□□ -0.05
ATF1P18846 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.73□□□□□ -0.05
ATF1P18846 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ATF1P18846 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ATF1P18846 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATF1P18846 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ATF1P18846 IER3-202ENST00000376377 1350 ntBASIC14.73□□□□□ -0.05
ATF1P18846 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.72□□□□□ -0.05
ATF1P18846 NUS1P1-201ENST00000446295 882 ntBASIC14.72□□□□□ -0.05
ATF1P18846 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.72□□□□□ -0.05
ATF1P18846 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.72□□□□□ -0.05
ATF1P18846 AC074051.2-201ENST00000565115 352 ntBASIC14.72□□□□□ -0.05
ATF1P18846 AC087388.1-201ENST00000571370 1112 ntBASIC14.72□□□□□ -0.05
ATF1P18846 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 AC114341.1-201ENST00000618070 349 ntBASIC14.72□□□□□ -0.05
ATF1P18846 AP000867.4-201ENST00000641616 219 ntBASIC14.72□□□□□ -0.05
ATF1P18846 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.72□□□□□ -0.05
ATF1P18846 LINC00895-201ENST00000629028 1637 ntBASIC14.72□□□□□ -0.05
ATF1P18846 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.72□□□□□ -0.05
ATF1P18846 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.72□□□□□ -0.05
ATF1P18846 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATF1P18846 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 AC148477.5-201ENST00000625164 1645 ntBASIC14.71□□□□□ -0.05
ATF1P18846 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.71□□□□□ -0.05
ATF1P18846 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.71□□□□□ -0.05
ATF1P18846 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATF1P18846 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.71□□□□□ -0.05
ATF1P18846 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms