Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1DP16402 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1DP16402 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1DP16402 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1DP16402 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H1DP16402 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H1DP16402 AL671710.1-201ENST00000610245 2349 ntBASIC14.23□□□□□ -0.13
HIST1H1DP16402 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 AC114341.1-201ENST00000618070 349 ntBASIC14.22□□□□□ -0.13
HIST1H1DP16402 AC073592.4-201ENST00000623827 446 ntBASIC14.22□□□□□ -0.13
HIST1H1DP16402 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HIST1H1DP16402 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 TOP3BP1-201ENST00000420768 1380 ntBASIC14.22□□□□□ -0.13
HIST1H1DP16402 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HIST1H1DP16402 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H1DP16402 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1DP16402 SNX33P1-201ENST00000592116 1762 ntBASIC14.21□□□□□ -0.13
HIST1H1DP16402 PKD1P5-201ENST00000532415 10291 ntBASIC14.21□□□□□ -0.13
HIST1H1DP16402 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1DP16402 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1DP16402 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HIST1H1DP16402 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms