Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.73□□□□□ -0.05
UBCP0CG48 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.73□□□□□ -0.05
UBCP0CG48 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
UBCP0CG48 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.73□□□□□ -0.05
UBCP0CG48 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.73□□□□□ -0.05
UBCP0CG48 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
UBCP0CG48 AC099336.1-202ENST00000602961 463 ntBASIC14.73□□□□□ -0.05
UBCP0CG48 AL353135.1-201ENST00000606729 504 ntBASIC14.73□□□□□ -0.05
UBCP0CG48 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
UBCP0CG48 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.73□□□□□ -0.05
UBCP0CG48 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 NCF1C-201ENST00000438382 1427 ntBASIC14.73□□□□□ -0.05
UBCP0CG48 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
UBCP0CG48 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBCP0CG48 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 AL590787.1-201ENST00000568856 1315 ntBASIC14.72□□□□□ -0.05
UBCP0CG48 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
UBCP0CG48 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 NUS1P2-201ENST00000417358 873 ntBASIC14.72□□□□□ -0.05
UBCP0CG48 KRT18P21-201ENST00000515767 1272 ntBASIC14.72□□□□□ -0.05
UBCP0CG48 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.72□□□□□ -0.05
UBCP0CG48 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 MIR5100-201ENST00000579544 119 ntBASIC14.72□□□□□ -0.05
UBCP0CG48 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.72□□□□□ -0.05
UBCP0CG48 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
UBCP0CG48 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBCP0CG48 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UBCP0CG48 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.71□□□□□ -0.05
UBCP0CG48 AC092364.2-201ENST00000596710 2692 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.71□□□□□ -0.05
UBCP0CG48 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.71□□□□□ -0.05
UBCP0CG48 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 PRYP5-201ENST00000451909 266 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.71□□□□□ -0.05
UBCP0CG48 MIR3180-1-201ENST00000580374 94 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 MIR3180-3-201ENST00000584616 94 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBCP0CG48 AL591684.3-201ENST00000605187 298 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 AC069148.1-201ENST00000608741 768 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.71□□□□□ -0.05
UBCP0CG48 AL590326.2-201ENST00000625139 305 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 AP000550.4-202ENST00000639755 178 ntBASIC14.71□□□□□ -0.05
UBCP0CG48 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms