Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC172P0C7W6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 AC008608.2-201ENST00000606089 416 ntBASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC172P0C7W6 CYP2T1P-202ENST00000641596 2535 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 AC006449.5-201ENST00000610658 2098 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 TSPY19P-201ENST00000418461 509 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 TSPY18P-201ENST00000441642 509 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PAWRP1-201ENST00000451083 565 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PRELID1P1-202ENST00000567272 903 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 MTDHP4-201ENST00000600287 670 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 AC004706.3-202ENST00000621574 984 ntBASIC18.12■□□□□ 0.49
CCDC172P0C7W6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC172P0C7W6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC172P0C7W6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms