Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.32■□□□□ 0.36
CD48P09326 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.32■□□□□ 0.36
CD48P09326 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CD48P09326 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.32■□□□□ 0.36
CD48P09326 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.32■□□□□ 0.36
CD48P09326 CYP2T1P-202ENST00000641596 2535 ntBASIC17.32■□□□□ 0.36
CD48P09326 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.32■□□□□ 0.36
CD48P09326 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD48P09326 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
CD48P09326 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CD48P09326 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CD48P09326 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CD48P09326 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD48P09326 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.31■□□□□ 0.36
CD48P09326 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.31■□□□□ 0.36
CD48P09326 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.31■□□□□ 0.36
CD48P09326 AL662844.1-201ENST00000546340 181 ntBASIC17.31■□□□□ 0.36
CD48P09326 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD48P09326 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
CD48P09326 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 AC026691.1-201ENST00000602502 2017 ntBASIC17.31■□□□□ 0.36
CD48P09326 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.31■□□□□ 0.36
CD48P09326 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.31■□□□□ 0.36
CD48P09326 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD48P09326 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 PCDHA1-201ENST00000378133 2726 ntBASIC17.3■□□□□ 0.36
CD48P09326 CICP6-201ENST00000457191 2729 ntBASIC17.3■□□□□ 0.36
CD48P09326 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD48P09326 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.3■□□□□ 0.36
CD48P09326 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD48P09326 HCG4-201ENST00000418983 998 ntBASIC17.3■□□□□ 0.36
CD48P09326 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.3■□□□□ 0.36
CD48P09326 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.3■□□□□ 0.36
CD48P09326 PRSS29P-201ENST00000440800 595 ntBASIC17.3■□□□□ 0.36
CD48P09326 VN2R19P-201ENST00000442399 1052 ntBASIC17.3■□□□□ 0.36
CD48P09326 CXCL1P1-201ENST00000502804 216 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms