Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGN1P05114 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HMGN1P05114 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
HMGN1P05114 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.2■□□□□ 0.02
HMGN1P05114 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGN1P05114 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGN1P05114 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HMGN1P05114 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 AC114341.1-201ENST00000618070 349 ntBASIC15.2■□□□□ 0.02
HMGN1P05114 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 NSUN5P1-202ENST00000421140 1535 ntBASIC15.2■□□□□ 0.02
HMGN1P05114 NSUN5P2-203ENST00000457352 1529 ntBASIC15.2■□□□□ 0.02
HMGN1P05114 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.2■□□□□ 0.02
HMGN1P05114 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.2■□□□□ 0.02
HMGN1P05114 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.2■□□□□ 0.02
HMGN1P05114 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HMGN1P05114 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HMGN1P05114 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HMGN1P05114 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.2■□□□□ 0.02
HMGN1P05114 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
HMGN1P05114 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 GGT3P-204ENST00000453783 1664 ntBASIC15.19■□□□□ 0.02
HMGN1P05114 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HMGN1P05114 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGN1P05114 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HMGN1P05114 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.19■□□□□ 0.02
HMGN1P05114 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 TSSC2-201ENST00000450217 709 ntBASIC15.19■□□□□ 0.02
HMGN1P05114 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
HMGN1P05114 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.19■□□□□ 0.02
HMGN1P05114 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.19■□□□□ 0.02
HMGN1P05114 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 AC010331.1-201ENST00000611423 582 ntBASIC15.19■□□□□ 0.02
HMGN1P05114 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.19■□□□□ 0.02
HMGN1P05114 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 AC073592.4-201ENST00000623827 446 ntBASIC15.19■□□□□ 0.02
HMGN1P05114 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGN1P05114 AC105917.1-201ENST00000506637 2539 ntBASIC15.19■□□□□ 0.02
HMGN1P05114 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGN1P05114 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGN1P05114 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGN1P05114 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGN1P05114 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HMGN1P05114 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 AC067930.6-201ENST00000623257 4947 ntBASIC15.18■□□□□ 0.02
HMGN1P05114 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGN1P05114 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGN1P05114 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGN1P05114 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGN1P05114 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms