Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
APPP05067 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
APPP05067 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
APPP05067 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.05■□□□□ 0.8
APPP05067 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 AL671710.1-201ENST00000610245 2349 ntBASIC20.05■□□□□ 0.8
APPP05067 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APPP05067 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.05■□□□□ 0.8
APPP05067 AC140658.5-201ENST00000438532 169 ntBASIC20.05■□□□□ 0.8
APPP05067 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.05■□□□□ 0.8
APPP05067 AP002490.2-201ENST00000524791 560 ntBASIC20.05■□□□□ 0.8
APPP05067 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.05■□□□□ 0.8
APPP05067 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
APPP05067 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.05■□□□□ 0.8
APPP05067 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.05■□□□□ 0.8
APPP05067 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.05■□□□□ 0.8
APPP05067 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
APPP05067 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.05■□□□□ 0.8
APPP05067 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APPP05067 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
APPP05067 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APPP05067 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APPP05067 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APPP05067 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
APPP05067 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.04■□□□□ 0.8
APPP05067 RNF216P1-203ENST00000404404 2427 ntBASIC20.04■□□□□ 0.8
APPP05067 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APPP05067 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APPP05067 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.04■□□□□ 0.8
APPP05067 AC112191.1-201ENST00000523689 701 ntBASIC20.04■□□□□ 0.8
APPP05067 AC055717.3-201ENST00000622967 595 ntBASIC20.04■□□□□ 0.8
APPP05067 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.04■□□□□ 0.8
APPP05067 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.04■□□□□ 0.8
APPP05067 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APPP05067 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.04■□□□□ 0.8
APPP05067 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.04■□□□□ 0.8
APPP05067 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.04■□□□□ 0.8
APPP05067 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APPP05067 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
APPP05067 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.03■□□□□ 0.8
APPP05067 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 AC106886.4-201ENST00000623557 2502 ntBASIC20.03■□□□□ 0.8
APPP05067 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 LINC00895-201ENST00000629028 1637 ntBASIC20.03■□□□□ 0.8
APPP05067 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.03■□□□□ 0.8
APPP05067 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APPP05067 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.03■□□□□ 0.8
APPP05067 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.03■□□□□ 0.8
APPP05067 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.03■□□□□ 0.8
APPP05067 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.03■□□□□ 0.8
APPP05067 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.03■□□□□ 0.8
APPP05067 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.03■□□□□ 0.8
APPP05067 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms