Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 SART3-203ENST00000546611 1184 ntBASIC15.3■□□□□ 0.04
HIST1H2ABP04908 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 REXO1L6P-202ENST00000619970 1078 ntBASIC15.3■□□□□ 0.04
HIST1H2ABP04908 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 AL645728.1-201ENST00000366221 2101 ntBASIC15.29■□□□□ 0.04
HIST1H2ABP04908 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIST1H2ABP04908 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 AL603756.1-201ENST00000606511 2163 ntBASIC15.28■□□□□ 0.04
HIST1H2ABP04908 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.28■□□□□ 0.04
HIST1H2ABP04908 AC006557.2-201ENST00000592985 1240 ntBASIC15.28■□□□□ 0.04
HIST1H2ABP04908 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.28■□□□□ 0.04
HIST1H2ABP04908 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms