Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 AC003669.1-201ENST00000334569 611 ntBASIC17.1■□□□□ 0.33
MT-ND3P03897 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
MT-ND3P03897 AC079776.4-201ENST00000511039 504 ntBASIC17.1■□□□□ 0.33
MT-ND3P03897 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.1■□□□□ 0.33
MT-ND3P03897 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 TSPY26P-202ENST00000565928 3884 ntBASIC17.1■□□□□ 0.33
MT-ND3P03897 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND3P03897 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND3P03897 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND3P03897 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
MT-ND3P03897 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.09■□□□□ 0.33
MT-ND3P03897 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND3P03897 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
MT-ND3P03897 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 AL022342.1-201ENST00000400363 863 ntBASIC17.09■□□□□ 0.33
MT-ND3P03897 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
MT-ND3P03897 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND3P03897 AF238378.1-201ENST00000526806 358 ntBASIC17.09■□□□□ 0.33
MT-ND3P03897 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND3P03897 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
MT-ND3P03897 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND3P03897 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND3P03897 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND3P03897 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
MT-ND3P03897 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND3P03897 AC132938.5-201ENST00000624980 1813 ntBASIC17.08■□□□□ 0.33
MT-ND3P03897 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
MT-ND3P03897 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.08■□□□□ 0.32
MT-ND3P03897 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.08■□□□□ 0.32
MT-ND3P03897 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.08■□□□□ 0.32
MT-ND3P03897 AF186996.4-201ENST00000467186 377 ntBASIC17.08■□□□□ 0.32
MT-ND3P03897 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.08■□□□□ 0.32
MT-ND3P03897 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.08■□□□□ 0.32
MT-ND3P03897 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.08■□□□□ 0.32
MT-ND3P03897 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.08■□□□□ 0.32
MT-ND3P03897 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.08■□□□□ 0.32
MT-ND3P03897 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.08■□□□□ 0.32
MT-ND3P03897 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND3P03897 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms