Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
APOEP02649 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.53■□□□□ 0.4
APOEP02649 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
APOEP02649 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
APOEP02649 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOEP02649 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOEP02649 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
APOEP02649 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.52■□□□□ 0.4
APOEP02649 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.52■□□□□ 0.4
APOEP02649 HCG4-201ENST00000418983 998 ntBASIC17.52■□□□□ 0.4
APOEP02649 AC004832.2-201ENST00000426397 482 ntBASIC17.52■□□□□ 0.4
APOEP02649 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.52■□□□□ 0.4
APOEP02649 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
APOEP02649 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.52■□□□□ 0.4
APOEP02649 PDPK2P-202ENST00000562415 1191 ntBASIC17.52■□□□□ 0.4
APOEP02649 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 AL513190.1-201ENST00000621254 727 ntBASIC17.52■□□□□ 0.4
APOEP02649 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
APOEP02649 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOEP02649 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
APOEP02649 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOEP02649 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
APOEP02649 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOEP02649 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOEP02649 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
APOEP02649 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.52■□□□□ 0.39
APOEP02649 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.52■□□□□ 0.39
APOEP02649 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
APOEP02649 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.51■□□□□ 0.39
APOEP02649 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
APOEP02649 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
APOEP02649 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 AC092865.5-201ENST00000545435 363 ntBASIC17.51■□□□□ 0.39
APOEP02649 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.51■□□□□ 0.39
APOEP02649 MPDU1-223ENST00000582151 728 ntBASIC17.51■□□□□ 0.39
APOEP02649 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.51■□□□□ 0.39
APOEP02649 MIR4515-201ENST00000584082 81 ntBASIC17.51■□□□□ 0.39
APOEP02649 AP001350.2-201ENST00000625104 1094 ntBASIC17.51■□□□□ 0.39
APOEP02649 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
APOEP02649 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APOEP02649 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
APOEP02649 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 PCDHB19P-201ENST00000570871 2371 ntBASIC17.51■□□□□ 0.39
APOEP02649 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOEP02649 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APOEP02649 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
APOEP02649 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms