Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 AC125634.1-201ENST00000438758 1403 ntBASIC14.47□□□□□ -0.09
HLA-DQB1P01920 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQB1P01920 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AL359258.3-201ENST00000622910 2331 ntBASIC14.46□□□□□ -0.09
HLA-DQB1P01920 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ATP5G1P1-201ENST00000448724 379 ntBASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AC010203.1-204ENST00000548782 407 ntBASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AC011558.1-201ENST00000623459 338 ntBASIC14.46□□□□□ -0.09
HLA-DQB1P01920 AC073912.3-201ENST00000624414 853 ntBASIC14.46□□□□□ -0.09
HLA-DQB1P01920 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQB1P01920 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 AC069224.1-201ENST00000566372 1715 ntBASIC14.46□□□□□ -0.1
HLA-DQB1P01920 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 LINC01101-201ENST00000622953 1884 ntBASIC14.46□□□□□ -0.1
HLA-DQB1P01920 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DQB1P01920 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 AC097637.2-201ENST00000624096 1997 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 AC087499.1-201ENST00000418141 1075 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 AC092597.1-201ENST00000487352 616 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 AC005332.3-201ENST00000589904 676 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 TMBIM7P-203ENST00000641617 1718 ntBASIC14.45□□□□□ -0.1
HLA-DQB1P01920 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DQB1P01920 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DQB1P01920 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms