Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 UNC93B2-201ENST00000285383 730 ntBASIC12.63□□□□□ -0.39
HLA-DQA1P01909 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 WWOX-216ENST00000569818 525 ntBASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DQA1P01909 KRT17P2-201ENST00000300992 1314 ntBASIC12.62□□□□□ -0.39
HLA-DQA1P01909 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 GRK6P1-201ENST00000400595 1711 ntBASIC12.62□□□□□ -0.39
HLA-DQA1P01909 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQA1P01909 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQA1P01909 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQA1P01909 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQA1P01909 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQA1P01909 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms