Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.14■□□□□ 0.33
MT-CO1P00395 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MT-CO1P00395 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MT-CO1P00395 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 ELL2P1-201ENST00000413990 1906 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MT-CO1P00395 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
MT-CO1P00395 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.13■□□□□ 0.33
MT-CO1P00395 AC140658.5-201ENST00000438532 169 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 CEND1P1-201ENST00000451006 455 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 AC091167.2-201ENST00000579581 588 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 MIR4492-201ENST00000581627 80 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 AL121761.2-201ENST00000598007 1648 ntBASIC17.13■□□□□ 0.33
MT-CO1P00395 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MT-CO1P00395 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
MT-CO1P00395 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MT-CO1P00395 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
MT-CO1P00395 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MT-CO1P00395 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
MT-CO1P00395 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-CO1P00395 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-CO1P00395 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-CO1P00395 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
MT-CO1P00395 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.12■□□□□ 0.33
MT-CO1P00395 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.12■□□□□ 0.33
MT-CO1P00395 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MT-CO1P00395 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MT-CO1P00395 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
MT-CO1P00395 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MT-CO1P00395 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-CO1P00395 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MT-CO1P00395 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms