Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 KRT8P39-201ENST00000396270 1433 ntBASIC17.49■□□□□ 0.39
TRUB2O95900 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.49■□□□□ 0.39
TRUB2O95900 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 AL512652.2-201ENST00000625156 1716 ntBASIC17.49■□□□□ 0.39
TRUB2O95900 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRUB2O95900 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.49■□□□□ 0.39
TRUB2O95900 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRUB2O95900 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 MCCD1P2-201ENST00000423228 335 ntBASIC17.48■□□□□ 0.39
TRUB2O95900 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.48■□□□□ 0.39
TRUB2O95900 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.48■□□□□ 0.39
TRUB2O95900 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.48■□□□□ 0.39
TRUB2O95900 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
TRUB2O95900 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRUB2O95900 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRUB2O95900 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRUB2O95900 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.47■□□□□ 0.39
TRUB2O95900 AC092919.2-201ENST00000623631 1645 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRUB2O95900 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 YBX2P1-201ENST00000394192 760 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.47■□□□□ 0.39
TRUB2O95900 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
TRUB2O95900 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.47■□□□□ 0.39
TRUB2O95900 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.47■□□□□ 0.39
TRUB2O95900 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 AC068137.2-201ENST00000605408 478 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.47■□□□□ 0.39
TRUB2O95900 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRUB2O95900 OR6D1P-203ENST00000641209 4860 ntBASIC17.47■□□□□ 0.39
TRUB2O95900 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRUB2O95900 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRUB2O95900 AC006449.5-201ENST00000610658 2098 ntBASIC17.46■□□□□ 0.39
TRUB2O95900 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms