Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC7.33□□□□□ -1.24
USH2AO75445 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 REXO1L9P-201ENST00000604264 2108 ntBASIC7.33□□□□□ -1.24
USH2AO75445 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC7.33□□□□□ -1.24
USH2AO75445 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 CLK3P2-201ENST00000427566 1453 ntBASIC7.33□□□□□ -1.24
USH2AO75445 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 HADH-212ENST00000638621 741 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
USH2AO75445 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC7.32□□□□□ -1.24
USH2AO75445 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC7.32□□□□□ -1.24
USH2AO75445 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 SCARNA20.5-201ENST00000516991 142 ntBASIC7.32□□□□□ -1.24
USH2AO75445 LY6E-208ENST00000520531 490 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 AC005357.2-202ENST00000590507 1060 ntBASIC7.32□□□□□ -1.24
USH2AO75445 CYP2A7P1-201ENST00000595391 815 ntBASIC7.32□□□□□ -1.24
USH2AO75445 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
USH2AO75445 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 HARS-202ENST00000415192 1401 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 IDS-203ENST00000428056 1213 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 AC016700.1-201ENST00000429424 312 ntBASIC7.32□□□□□ -1.24
USH2AO75445 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 AC008687.7-202ENST00000637404 953 ntBASIC7.32□□□□□ -1.24
USH2AO75445 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC7.32□□□□□ -1.24
USH2AO75445 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 HNRNPA1P32-201ENST00000396326 963 ntBASIC7.32□□□□□ -1.24
USH2AO75445 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC7.32□□□□□ -1.24
USH2AO75445 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC7.32□□□□□ -1.24
USH2AO75445 AC011491.1-203ENST00000637688 543 ntBASIC7.32□□□□□ -1.24
USH2AO75445 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USH2AO75445 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 ZBTB12BP-201ENST00000314232 1122 ntBASIC7.32□□□□□ -1.24
USH2AO75445 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC7.32□□□□□ -1.24
USH2AO75445 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC7.32□□□□□ -1.24
USH2AO75445 AC091804.1-201ENST00000486888 567 ntBASIC7.32□□□□□ -1.24
USH2AO75445 AL359711.2-201ENST00000563105 872 ntBASIC7.32□□□□□ -1.24
USH2AO75445 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC7.32□□□□□ -1.24
USH2AO75445 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms