Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
GADD45BO75293 LINC00265-3P-201ENST00000447588 903 ntBASIC19.15■□□□□ 0.66
GADD45BO75293 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GADD45BO75293 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.15■□□□□ 0.66
GADD45BO75293 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.15■□□□□ 0.66
GADD45BO75293 AL121956.5-201ENST00000625261 221 ntBASIC19.15■□□□□ 0.66
GADD45BO75293 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.15■□□□□ 0.66
GADD45BO75293 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.15■□□□□ 0.66
GADD45BO75293 TOP3BP1-201ENST00000420768 1380 ntBASIC19.15■□□□□ 0.66
GADD45BO75293 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.15■□□□□ 0.66
GADD45BO75293 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GADD45BO75293 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GADD45BO75293 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.14■□□□□ 0.66
GADD45BO75293 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GADD45BO75293 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GADD45BO75293 AC112504.1-201ENST00000623415 1841 ntBASIC19.14■□□□□ 0.65
GADD45BO75293 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.14■□□□□ 0.65
GADD45BO75293 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.14■□□□□ 0.65
GADD45BO75293 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.14■□□□□ 0.65
GADD45BO75293 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.14■□□□□ 0.65
GADD45BO75293 BX005266.1-201ENST00000473402 457 ntBASIC19.14■□□□□ 0.65
GADD45BO75293 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.14■□□□□ 0.65
GADD45BO75293 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 AC074051.2-201ENST00000565115 352 ntBASIC19.14■□□□□ 0.65
GADD45BO75293 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.14■□□□□ 0.65
GADD45BO75293 AC116407.4-201ENST00000623319 1061 ntBASIC19.14■□□□□ 0.65
GADD45BO75293 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.14■□□□□ 0.65
GADD45BO75293 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
GADD45BO75293 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
GADD45BO75293 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GADD45BO75293 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
GADD45BO75293 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 TSPY26P-202ENST00000565928 3884 ntBASIC19.13■□□□□ 0.65
GADD45BO75293 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GADD45BO75293 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.13■□□□□ 0.65
GADD45BO75293 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.13■□□□□ 0.65
GADD45BO75293 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.13■□□□□ 0.65
GADD45BO75293 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.13■□□□□ 0.65
GADD45BO75293 MIR3180-1-201ENST00000580374 94 ntBASIC19.13■□□□□ 0.65
GADD45BO75293 MIR3180-3-201ENST00000584616 94 ntBASIC19.13■□□□□ 0.65
GADD45BO75293 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 KRT8P39-201ENST00000396270 1433 ntBASIC19.13■□□□□ 0.65
GADD45BO75293 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.13■□□□□ 0.65
GADD45BO75293 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GADD45BO75293 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GADD45BO75293 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms