Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE3O75131 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE3O75131 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE3O75131 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE3O75131 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.09■□□□□ 0.17
CPNE3O75131 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE3O75131 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE3O75131 AL513210.1-201ENST00000629608 234 ntBASIC16.09■□□□□ 0.17
CPNE3O75131 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 AC016396.2-201ENST00000562575 1417 ntBASIC16.09■□□□□ 0.17
CPNE3O75131 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 NFIC-211ENST00000641145 8399 ntBASIC16.09■□□□□ 0.17
CPNE3O75131 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 EGFEM1P-202ENST00000431685 1563 ntBASIC16.09■□□□□ 0.17
CPNE3O75131 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CPNE3O75131 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.08■□□□□ 0.17
CPNE3O75131 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE3O75131 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CPNE3O75131 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE3O75131 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE3O75131 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CPNE3O75131 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE3O75131 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 AC140658.5-201ENST00000438532 169 ntBASIC16.08■□□□□ 0.16
CPNE3O75131 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE3O75131 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 MIR4515-201ENST00000584082 81 ntBASIC16.08■□□□□ 0.16
CPNE3O75131 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 AC027612.4-201ENST00000605371 583 ntBASIC16.08■□□□□ 0.16
CPNE3O75131 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE3O75131 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE3O75131 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE3O75131 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE3O75131 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 TSEN15P1-201ENST00000423257 515 ntBASIC16.07■□□□□ 0.16
CPNE3O75131 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.07■□□□□ 0.16
CPNE3O75131 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE3O75131 AC105339.1-204ENST00000636249 355 ntBASIC16.07■□□□□ 0.16
CPNE3O75131 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE3O75131 AL121761.2-201ENST00000598007 1648 ntBASIC16.07■□□□□ 0.16
CPNE3O75131 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CPNE3O75131 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE3O75131 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms