Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.27■■□□□ 1
KCNQ3O43525 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.27■■□□□ 1
KCNQ3O43525 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.27■■□□□ 1
KCNQ3O43525 AC009407.1-201ENST00000568958 598 ntBASIC21.27■■□□□ 1
KCNQ3O43525 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
KCNQ3O43525 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.27■■□□□ 1
KCNQ3O43525 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.27■■□□□ 1
KCNQ3O43525 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNQ3O43525 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KCNQ3O43525 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KCNQ3O43525 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KCNQ3O43525 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
KCNQ3O43525 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KCNQ3O43525 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KCNQ3O43525 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KCNQ3O43525 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.26■□□□□ 0.99
KCNQ3O43525 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.26■□□□□ 0.99
KCNQ3O43525 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.26■□□□□ 0.99
KCNQ3O43525 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNQ3O43525 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 AC093724.1-201ENST00000448659 1027 ntBASIC21.26■□□□□ 0.99
KCNQ3O43525 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KCNQ3O43525 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 TERF1P3-201ENST00000505638 1227 ntBASIC21.26■□□□□ 0.99
KCNQ3O43525 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.26■□□□□ 0.99
KCNQ3O43525 RN7SL828P-201ENST00000607615 303 ntBASIC21.26■□□□□ 0.99
KCNQ3O43525 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNQ3O43525 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNQ3O43525 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KCNQ3O43525 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNQ3O43525 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNQ3O43525 MTND6P24-201ENST00000440466 518 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KCNQ3O43525 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.25■□□□□ 0.99
KCNQ3O43525 RNA5SP410-201ENST00000516285 106 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 AC105021.1-202ENST00000570572 669 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNQ3O43525 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNQ3O43525 TEX28P1-201ENST00000613479 1221 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 TEX28P2-201ENST00000617764 1221 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KCNQ3O43525 GPAA1P2-202ENST00000606848 1787 ntBASIC21.25■□□□□ 0.99
KCNQ3O43525 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNQ3O43525 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KCNQ3O43525 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
KCNQ3O43525 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNQ3O43525 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNQ3O43525 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNQ3O43525 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNQ3O43525 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KCNQ3O43525 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNQ3O43525 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNQ3O43525 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.24■□□□□ 0.99
KCNQ3O43525 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms