Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTSS1O43312 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.09■□□□□ 0.33
MTSS1O43312 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.09■□□□□ 0.33
MTSS1O43312 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTSS1O43312 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTSS1O43312 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTSS1O43312 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
MTSS1O43312 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.08■□□□□ 0.33
MTSS1O43312 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
MTSS1O43312 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.08■□□□□ 0.33
MTSS1O43312 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.08■□□□□ 0.33
MTSS1O43312 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.08■□□□□ 0.33
MTSS1O43312 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
MTSS1O43312 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTSS1O43312 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
MTSS1O43312 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 VN2R19P-201ENST00000442399 1052 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.08■□□□□ 0.32
MTSS1O43312 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.08■□□□□ 0.32
MTSS1O43312 AL049840.3-201ENST00000602669 611 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 ACTL9-202ENST00000612068 1252 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 AL645728.2-201ENST00000641974 660 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.08■□□□□ 0.32
MTSS1O43312 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MTSS1O43312 PCDHB19P-201ENST00000570871 2371 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.08■□□□□ 0.32
MTSS1O43312 AL671710.1-201ENST00000610245 2349 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 AL031731.1-201ENST00000642131 2094 ntBASIC17.08■□□□□ 0.32
MTSS1O43312 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.08■□□□□ 0.32
MTSS1O43312 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTSS1O43312 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.07■□□□□ 0.32
MTSS1O43312 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MTSS1O43312 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
MTSS1O43312 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.07■□□□□ 0.32
MTSS1O43312 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.07■□□□□ 0.32
MTSS1O43312 CRYGEP-201ENST00000412192 528 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.07■□□□□ 0.32
MTSS1O43312 AC009947.1-201ENST00000444350 727 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 IGHV3-22-201ENST00000520721 359 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 UNC93B6-202ENST00000528242 690 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.07■□□□□ 0.32
MTSS1O43312 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.07■□□□□ 0.32
MTSS1O43312 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 TNRC18P3-201ENST00000441896 2691 ntBASIC17.07■□□□□ 0.32
MTSS1O43312 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.07■□□□□ 0.32
MTSS1O43312 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
MTSS1O43312 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTSS1O43312 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MTSS1O43312 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms