Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRGAP3O43295 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SRGAP3O43295 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 WASH6P-202ENST00000359512 1437 ntBASIC20.7■□□□□ 0.9
SRGAP3O43295 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
SRGAP3O43295 AC004967.1-201ENST00000453589 447 ntBASIC20.7■□□□□ 0.9
SRGAP3O43295 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SRGAP3O43295 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.7■□□□□ 0.9
SRGAP3O43295 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.7■□□□□ 0.9
SRGAP3O43295 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.7■□□□□ 0.9
SRGAP3O43295 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRGAP3O43295 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SRGAP3O43295 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.69■□□□□ 0.9
SRGAP3O43295 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 TFAMP1-201ENST00000412727 736 ntBASIC20.69■□□□□ 0.9
SRGAP3O43295 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
SRGAP3O43295 AL135744.1-201ENST00000565098 629 ntBASIC20.69■□□□□ 0.9
SRGAP3O43295 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.69■□□□□ 0.9
SRGAP3O43295 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SRGAP3O43295 AL691403.2-201ENST00000618460 490 ntBASIC20.69■□□□□ 0.9
SRGAP3O43295 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.69■□□□□ 0.9
SRGAP3O43295 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.69■□□□□ 0.9
SRGAP3O43295 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRGAP3O43295 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.68■□□□□ 0.9
SRGAP3O43295 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.68■□□□□ 0.9
SRGAP3O43295 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.68■□□□□ 0.9
SRGAP3O43295 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 KRT8P48-201ENST00000515599 1220 ntBASIC20.68■□□□□ 0.9
SRGAP3O43295 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
SRGAP3O43295 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.68■□□□□ 0.9
SRGAP3O43295 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.68■□□□□ 0.9
SRGAP3O43295 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.68■□□□□ 0.9
SRGAP3O43295 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRGAP3O43295 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SRGAP3O43295 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SRGAP3O43295 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 GPAA1P2-202ENST00000606848 1787 ntBASIC20.67■□□□□ 0.9
SRGAP3O43295 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SRGAP3O43295 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.67■□□□□ 0.9
SRGAP3O43295 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRGAP3O43295 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms