Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 AP001160.2-201ENST00000596071 487 ntBASIC16■□□□□ 0.15
PCDH17O14917 AC023141.13-201ENST00000604991 943 ntBASIC16■□□□□ 0.15
PCDH17O14917 FER1L4-210ENST00000615531 5998 ntBASIC16■□□□□ 0.15
PCDH17O14917 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDH17O14917 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH17O14917 IGLL3P-201ENST00000412472 434 ntBASIC15.99■□□□□ 0.15
PCDH17O14917 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH17O14917 FAM185BP-201ENST00000443595 716 ntBASIC15.99■□□□□ 0.15
PCDH17O14917 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH17O14917 PDPK2P-202ENST00000562415 1191 ntBASIC15.99■□□□□ 0.15
PCDH17O14917 OR7E47P-204ENST00000575924 449 ntBASIC15.99■□□□□ 0.15
PCDH17O14917 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDH17O14917 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDH17O14917 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH17O14917 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH17O14917 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDH17O14917 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH17O14917 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH17O14917 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH17O14917 ACTG1P14-201ENST00000446382 1122 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 KRT18P2-201ENST00000447938 1258 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 AC004967.1-201ENST00000453589 447 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH17O14917 AC087163.2-201ENST00000457299 853 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH17O14917 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH17O14917 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH17O14917 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH17O14917 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH17O14917 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 C20orf181-201ENST00000623918 480 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 AC010507.1-201ENST00000633895 436 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
PCDH17O14917 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH17O14917 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH17O14917 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH17O14917 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH17O14917 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms