Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AC022210.1-201ENST00000449856 793 ntBASIC16.29■□□□□ 0.2
C4orf47A7E2U8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AC008494.3-201ENST00000606615 944 ntBASIC16.29■□□□□ 0.2
C4orf47A7E2U8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 FLJ13224-201ENST00000313737 1514 ntBASIC16.29■□□□□ 0.2
C4orf47A7E2U8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 AC091167.2-201ENST00000579581 588 ntBASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 CHCHD2P3-201ENST00000603038 451 ntBASIC16.28■□□□□ 0.2
C4orf47A7E2U8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
C4orf47A7E2U8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 SPDYE19P-201ENST00000338590 713 ntBASIC16.27■□□□□ 0.2
C4orf47A7E2U8 HLA-H-201ENST00000383620 1096 ntBASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 LINC01451-201ENST00000623792 534 ntBASIC16.27■□□□□ 0.2
C4orf47A7E2U8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AC106820.2-201ENST00000563775 3264 ntBASIC16.27■□□□□ 0.2
C4orf47A7E2U8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C4orf47A7E2U8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
C4orf47A7E2U8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C4orf47A7E2U8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms