Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 AC106820.2-201ENST00000563775 3264 ntBASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TBC1D3FA6NER0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AC006277.1-201ENST00000624348 1610 ntBASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 LINC00895-201ENST00000629028 1637 ntBASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 BASP1P1-201ENST00000430708 665 ntBASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 INGX-202ENST00000489074 768 ntBASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3FA6NER0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 IGHV3-42-201ENST00000520410 361 ntBASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AC140878.1-201ENST00000565277 250 ntBASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3FA6NER0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 AL023806.1-201ENST00000603994 1649 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 AL671710.1-201ENST00000610245 2349 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 TREML5P-201ENST00000421694 576 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3FA6NER0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms