Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.78■□□□□ 0.44
RCCD1A6NED2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 AC092850.2-201ENST00000623821 2697 ntBASIC17.77■□□□□ 0.44
RCCD1A6NED2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 GPAA1P2-202ENST00000606848 1787 ntBASIC17.77■□□□□ 0.44
RCCD1A6NED2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.77■□□□□ 0.44
RCCD1A6NED2 AL022326.1-202ENST00000641533 845 ntBASIC17.77■□□□□ 0.44
RCCD1A6NED2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCCD1A6NED2 CDC14C-201ENST00000428251 1719 ntBASIC17.77■□□□□ 0.44
RCCD1A6NED2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.77■□□□□ 0.43
RCCD1A6NED2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.77■□□□□ 0.43
RCCD1A6NED2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.77■□□□□ 0.43
RCCD1A6NED2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.77■□□□□ 0.43
RCCD1A6NED2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.77■□□□□ 0.43
RCCD1A6NED2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCCD1A6NED2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 AC131009.4-201ENST00000624048 1740 ntBASIC17.76■□□□□ 0.43
RCCD1A6NED2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 SLC25A6P2-201ENST00000497974 877 ntBASIC17.76■□□□□ 0.43
RCCD1A6NED2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 AC138894.3-201ENST00000603787 634 ntBASIC17.76■□□□□ 0.43
RCCD1A6NED2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
RCCD1A6NED2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RCCD1A6NED2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 PCGF3-213ENST00000620529 1899 ntBASIC17.75■□□□□ 0.43
RCCD1A6NED2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.75■□□□□ 0.43
RCCD1A6NED2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCCD1A6NED2 AC073347.1-201ENST00000421633 2643 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms