Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 AL645608.8-201ENST00000606034 2086 ntBASIC14.59□□□□□ -0.07
MBD3L3A6NE82 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MBD3L3A6NE82 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MBD3L3A6NE82 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AL031731.1-201ENST00000642131 2094 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 TSPY16P-201ENST00000449843 468 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 COX20P2-201ENST00000452636 358 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AC004890.2-204ENST00000481968 304 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 RNA5SP410-201ENST00000516285 106 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AC006538.1-201ENST00000567905 1585 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.58□□□□□ -0.08
MBD3L3A6NE82 AC100757.3-201ENST00000622361 1406 ntBASIC14.58□□□□□ -0.08
MBD3L3A6NE82 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AC002472.2-201ENST00000442739 958 ntBASIC14.57□□□□□ -0.08
MBD3L3A6NE82 UGT1A2P-201ENST00000454886 866 ntBASIC14.57□□□□□ -0.08
MBD3L3A6NE82 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TERF1P3-201ENST00000505638 1227 ntBASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AL138828.2-201ENST00000615812 383 ntBASIC14.57□□□□□ -0.08
MBD3L3A6NE82 AL590560.3-201ENST00000623350 461 ntBASIC14.57□□□□□ -0.08
MBD3L3A6NE82 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MBD3L3A6NE82 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MBD3L3A6NE82 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms