Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PALM3A6NDB9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PALM3A6NDB9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 UBALD1-205ENST00000590891 2641 ntBASIC19.24■□□□□ 0.67
PALM3A6NDB9 LTB4R2-202ENST00000528054 3092 ntBASIC19.24■□□□□ 0.67
PALM3A6NDB9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 AC011676.5-201ENST00000624864 2660 ntBASIC19.24■□□□□ 0.67
PALM3A6NDB9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 AC092183.1-201ENST00000469884 875 ntBASIC19.24■□□□□ 0.67
PALM3A6NDB9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 AC008267.7-201ENST00000624570 1194 ntBASIC19.24■□□□□ 0.67
PALM3A6NDB9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PALM3A6NDB9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
PALM3A6NDB9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 MIR346-201ENST00000362234 95 ntBASIC19.23■□□□□ 0.67
PALM3A6NDB9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 AL627223.1-201ENST00000416693 442 ntBASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 AC027307.2-201ENST00000591252 911 ntBASIC19.23■□□□□ 0.67
PALM3A6NDB9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.23■□□□□ 0.67
PALM3A6NDB9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PALM3A6NDB9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.22■□□□□ 0.67
PALM3A6NDB9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 GGT3P-204ENST00000453783 1664 ntBASIC19.22■□□□□ 0.67
PALM3A6NDB9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PALM3A6NDB9 FAM58DP-201ENST00000428076 619 ntBASIC19.22■□□□□ 0.67
PALM3A6NDB9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 KRT8P23-201ENST00000560090 1207 ntBASIC19.22■□□□□ 0.67
PALM3A6NDB9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
PALM3A6NDB9 AC073389.1-201ENST00000595595 795 ntBASIC19.22■□□□□ 0.67
PALM3A6NDB9 AC020765.3-201ENST00000613051 740 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms