Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 DNAJB3-202ENST00000449667 1266 ntBASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 CXCL1P1-201ENST00000502804 216 ntBASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 C20orf181-201ENST00000623918 480 ntBASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPDC1A2A3K4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AC023141.13-201ENST00000604991 943 ntBASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AL596442.2-201ENST00000610240 980 ntBASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AC007064.4-201ENST00000637740 555 ntBASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 AC006538.1-201ENST00000567905 1585 ntBASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 SNX33P1-201ENST00000592116 1762 ntBASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPDC1A2A3K4 ALOX12P2-203ENST00000570921 1945 ntBASIC19.64■□□□□ 0.74
PTPDC1A2A3K4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPDC1A2A3K4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPDC1A2A3K4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 HTR5BP-201ENST00000430851 1154 ntBASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 HLA-J-202ENST00000469281 1241 ntBASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 AC107918.2-201ENST00000530817 355 ntBASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPDC1A2A3K4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 PCDH8P1-201ENST00000428983 2773 ntBASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPDC1A2A3K4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms