Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 NSUN5P1-202ENST00000421140 1535 ntBASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 NSUN5P2-203ENST00000457352 1529 ntBASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 BX276092.7-203ENST00000637198 1536 ntBASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4B1Q9Y6B7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 POM121L3P-201ENST00000419331 1163 ntBASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AP005901.3-202ENST00000581653 237 ntBASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4B1Q9Y6B7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4B1Q9Y6B7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms