Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 GGT4P-201ENST00000623672 1708 ntBASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 AC087641.1-201ENST00000557561 1021 ntBASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 AL391005.1-201ENST00000623953 2435 ntBASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CYP46A1Q9Y6A2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 AP001350.2-201ENST00000625104 1094 ntBASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 FAM215A-202ENST00000632077 792 ntBASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CYP46A1Q9Y6A2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 AC004870.1-201ENST00000315132 882 ntBASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 MRPL20P1-201ENST00000400819 433 ntBASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.83■□□□□ 0.77
CYP46A1Q9Y6A2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms