Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 AP002414.1-201ENST00000391405 1147 ntBASIC19.24■□□□□ 0.67
USP25Q9UHP3 NUS1P2-201ENST00000417358 873 ntBASIC19.24■□□□□ 0.67
USP25Q9UHP3 LINC00982-205ENST00000420957 435 ntBASIC19.24■□□□□ 0.67
USP25Q9UHP3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 AP005117.1-201ENST00000584346 1413 ntBASIC19.24■□□□□ 0.67
USP25Q9UHP3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 AL645728.1-201ENST00000366221 2101 ntBASIC19.24■□□□□ 0.67
USP25Q9UHP3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 DUX4L17-201ENST00000557360 1267 ntBASIC19.23■□□□□ 0.67
USP25Q9UHP3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.23■□□□□ 0.67
USP25Q9UHP3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.23■□□□□ 0.67
USP25Q9UHP3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP25Q9UHP3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 AC104640.1-201ENST00000562617 2109 ntBASIC19.22■□□□□ 0.67
USP25Q9UHP3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP25Q9UHP3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP25Q9UHP3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 AL021920.2-201ENST00000624828 1351 ntBASIC19.21■□□□□ 0.67
USP25Q9UHP3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms