Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 AC092053.1-201ENST00000605787 1936 ntBASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 AC124947.2-201ENST00000547118 1133 ntBASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.35■□□□□ 0.37
DNMT3BQ9UBC3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 HLA-H-201ENST00000383620 1096 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 GAPDHP21-201ENST00000450301 1010 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 AC022144.1-201ENST00000602255 1580 ntBASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DNMT3BQ9UBC3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 AC073439.1-201ENST00000624121 1774 ntBASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 AC006277.1-201ENST00000624348 1610 ntBASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
DNMT3BQ9UBC3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 TUBB7P-202ENST00000428444 1305 ntBASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.33■□□□□ 0.36
DNMT3BQ9UBC3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms