Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 PCGF3-213ENST00000620529 1899 ntBASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 AC109635.5-201ENST00000533593 962 ntBASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BLOC1S4Q9NUP1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AC092474.2-201ENST00000424288 719 ntBASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AP002472.1-201ENST00000577490 586 ntBASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AC021097.1-201ENST00000607902 574 ntBASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BLOC1S4Q9NUP1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 AC074386.1-202ENST00000463561 864 ntBASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 POLD2P1-201ENST00000511220 997 ntBASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.53■□□□□ 0.56
BLOC1S4Q9NUP1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BLOC1S4Q9NUP1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms