Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 AC084018.2-201ENST00000613093 2607 ntBASIC20.03■□□□□ 0.8
SALL1Q9NSC2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL1Q9NSC2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 AC093214.1-201ENST00000511688 1107 ntBASIC20.02■□□□□ 0.8
SALL1Q9NSC2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 FO538757.1-201ENST00000623083 1397 ntBASIC20.02■□□□□ 0.8
SALL1Q9NSC2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.02■□□□□ 0.8
SALL1Q9NSC2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 AL391256.1-201ENST00000443260 1855 ntBASIC20.02■□□□□ 0.79
SALL1Q9NSC2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 FAM220BP-201ENST00000377689 816 ntBASIC20.02■□□□□ 0.79
SALL1Q9NSC2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 TREML5P-201ENST00000421694 576 ntBASIC20.02■□□□□ 0.79
SALL1Q9NSC2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 AC018529.1-201ENST00000613063 361 ntBASIC20.02■□□□□ 0.79
SALL1Q9NSC2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.02■□□□□ 0.79
SALL1Q9NSC2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 FLJ38576-201ENST00000623820 2459 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 RNF216P1-203ENST00000404404 2427 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 AL645728.1-201ENST00000366221 2101 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 BASP1P1-201ENST00000430708 665 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 AC069120.2-201ENST00000524091 540 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 MIR4453-201ENST00000584019 89 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 AC007967.4-201ENST00000614700 386 ntBASIC20.01■□□□□ 0.79
SALL1Q9NSC2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SALL1Q9NSC2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms