Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SCARNA2-201ENST00000458748 420 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 KRT18P56-201ENST00000507275 550 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 AF228730.7-201ENST00000641842 219 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 GGT3P-204ENST00000453783 1664 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SNX33P1-201ENST00000592116 1762 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 AC002310.6-201ENST00000624451 1377 ntBASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
LRTM1Q9HBL6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 AL671710.1-201ENST00000610245 2349 ntBASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.12■□□□□ 0.17
LRTM1Q9HBL6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 TPM4P1-201ENST00000436100 807 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 PRELID1P1-202ENST00000567272 903 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 MIR4492-201ENST00000581627 80 ntBASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LRTM1Q9HBL6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms