Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 AC132872.4-202ENST00000622924 2756 ntBASIC15.53■□□□□ 0.08
POLR2J3Q9H1A7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 TSPY26P-202ENST00000565928 3884 ntBASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 AL589182.2-201ENST00000619332 1049 ntBASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 AC006277.1-201ENST00000624348 1610 ntBASIC15.52■□□□□ 0.08
POLR2J3Q9H1A7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.52■□□□□ 0.07
POLR2J3Q9H1A7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 TOP3BP1-201ENST00000420768 1380 ntBASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
POLR2J3Q9H1A7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
POLR2J3Q9H1A7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms