Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11XQ9BZA7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11XQ9BZA7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11XQ9BZA7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AC079776.1-201ENST00000401540 1152 ntBASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AC011495.1-201ENST00000498085 584 ntBASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 AC020765.3-201ENST00000613051 740 ntBASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11XQ9BZA7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 SRD5A3P1-201ENST00000603021 949 ntBASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 AL162274.1-201ENST00000617191 1098 ntBASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 AL512652.2-201ENST00000625156 1716 ntBASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH11XQ9BZA7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 AP002490.2-201ENST00000524791 560 ntBASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 AC017083.2-201ENST00000608069 979 ntBASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH11XQ9BZA7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms