Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LINC00982-205ENST00000420957 435 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AL020989.1-201ENST00000422979 469 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC063952.2-201ENST00000498792 1227 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 KRT8P26-201ENST00000534154 1276 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC092451.2-201ENST00000538746 658 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 TERC-201ENST00000602385 541 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AL118556.2-201ENST00000614375 824 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC068418.2-201ENST00000577309 3703 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC073347.1-201ENST00000421633 2643 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 AC112504.1-201ENST00000623415 1841 ntBASIC8.52□□□□□ -1.04
KRTAP3-1Q9BYR8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 AL031731.1-201ENST00000642131 2094 ntBASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 AC243591.1-201ENST00000452967 1364 ntBASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 RCN1P2-201ENST00000398357 915 ntBASIC8.52□□□□□ -1.05
KRTAP3-1Q9BYR8 SPDYE21P-201ENST00000413323 827 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms