Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AF186996.4-201ENST00000467186 377 ntBASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 KRT8P49-201ENST00000604166 1432 ntBASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 AL773604.1-201ENST00000617417 272 ntBASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 AC107918.4-202ENST00000641623 219 ntBASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 NFIC-211ENST00000641145 8399 ntBASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
YIPF4Q9BSR8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 LAGE3P1-201ENST00000425356 484 ntBASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 AP002490.2-201ENST00000524791 560 ntBASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 BX640515.1-201ENST00000617215 977 ntBASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 AC046158.3-201ENST00000624947 2558 ntBASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
YIPF4Q9BSR8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 HNRNPDP1-201ENST00000439535 754 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 PAWRP1-201ENST00000451083 565 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 AC087163.2-201ENST00000457299 853 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 AC006557.2-201ENST00000592985 1240 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 AC148477.8-201ENST00000624298 468 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 AC092364.2-201ENST00000596710 2692 ntBASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
YIPF4Q9BSR8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms