Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AC006277.1-201ENST00000624348 1610 ntBASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AC079776.2-201ENST00000641154 1609 ntBASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AC105917.1-201ENST00000506637 2539 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MTHFR-217ENST00000641820 1569 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AL671710.1-201ENST00000610245 2349 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AC011270.2-201ENST00000624293 2550 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ABCD1P5-201ENST00000445663 754 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AC104819.1-201ENST00000504587 486 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MIR3180-1-201ENST00000580374 94 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MIR3180-3-201ENST00000584616 94 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AC099336.1-202ENST00000602961 463 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 IER3-202ENST00000376377 1350 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 AL596257.1-201ENST00000641463 2694 ntBASIC14.18□□□□□ -0.14
HDHD3Q9BSH5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 AL590787.1-201ENST00000568856 1315 ntBASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 BX005266.1-201ENST00000473402 457 ntBASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 TERC-201ENST00000602385 541 ntBASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 AC073592.4-201ENST00000623827 446 ntBASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms