Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SCARNA2-201ENST00000458748 420 ntBASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERPUD2Q9BSE4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HERPUD2Q9BSE4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 AC010491.1-201ENST00000563101 2797 ntBASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 AC091167.2-201ENST00000579581 588 ntBASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HERPUD2Q9BSE4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 AP002414.3-201ENST00000589352 1468 ntBASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 AF186996.4-201ENST00000467186 377 ntBASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 OR7E47P-204ENST00000575924 449 ntBASIC17.32■□□□□ 0.36
HERPUD2Q9BSE4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms