Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 AL009183.1-201ENST00000603760 355 ntBASIC13.9□□□□□ -0.18
GAFA1Q96PS6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 AL031731.1-201ENST00000642131 2094 ntBASIC13.9□□□□□ -0.18
GAFA1Q96PS6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GAFA1Q96PS6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PMS2P4-201ENST00000412466 1052 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 AC109635.5-201ENST00000533593 962 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 AP002472.1-201ENST00000577490 586 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 AC021097.1-201ENST00000607902 574 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 GGT4P-201ENST00000623672 1708 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 PCDHA14-201ENST00000506751 2298 ntBASIC13.89□□□□□ -0.19
GAFA1Q96PS6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GAFA1Q96PS6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 GGT3P-204ENST00000453783 1664 ntBASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AC004832.2-201ENST00000426397 482 ntBASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.88□□□□□ -0.19
GAFA1Q96PS6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms