Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 AL049757.1-201ENST00000616842 1596 ntBASIC12.81□□□□□ -0.36
SMIM12Q96EX1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM12Q96EX1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC007967.3-201ENST00000434308 558 ntBASIC12.8□□□□□ -0.36
SMIM12Q96EX1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC009336.1-201ENST00000608941 1553 ntBASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AL353692.3-201ENST00000407031 1396 ntBASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM12Q96EX1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 HMGA1P5-201ENST00000412453 271 ntBASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.79□□□□□ -0.36
SMIM12Q96EX1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms