Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.16■□□□□ 0.18
VPS33AQ96AX1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC024909.3-201ENST00000611513 2257 ntBASIC16.15■□□□□ 0.18
VPS33AQ96AX1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 SPDYE21P-201ENST00000413323 827 ntBASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AP000867.4-201ENST00000641616 219 ntBASIC16.15■□□□□ 0.18
VPS33AQ96AX1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AC105917.1-201ENST00000506637 2539 ntBASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 AL365203.3-201ENST00000609742 2057 ntBASIC16.15■□□□□ 0.18
VPS33AQ96AX1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS33AQ96AX1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
VPS33AQ96AX1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
VPS33AQ96AX1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.14■□□□□ 0.18
VPS33AQ96AX1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.14■□□□□ 0.18
VPS33AQ96AX1 AC092850.2-201ENST00000623821 2697 ntBASIC16.14■□□□□ 0.17
VPS33AQ96AX1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 AP002414.1-201ENST00000391405 1147 ntBASIC16.14■□□□□ 0.17
VPS33AQ96AX1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 HLA-J-202ENST00000469281 1241 ntBASIC16.14■□□□□ 0.17
VPS33AQ96AX1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 Z69720.1-201ENST00000601483 472 ntBASIC16.14■□□□□ 0.17
VPS33AQ96AX1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS33AQ96AX1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms