Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF34Q969K3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNF34Q969K3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF34Q969K3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RNF34Q969K3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF34Q969K3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF34Q969K3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNF34Q969K3 AC087641.1-201ENST00000557561 1021 ntBASIC17.52■□□□□ 0.4
RNF34Q969K3 AC040169.1-201ENST00000565382 521 ntBASIC17.52■□□□□ 0.4
RNF34Q969K3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF34Q969K3 MIR4515-201ENST00000584082 81 ntBASIC17.52■□□□□ 0.4
RNF34Q969K3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
RNF34Q969K3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF34Q969K3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNF34Q969K3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
RNF34Q969K3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF34Q969K3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNF34Q969K3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF34Q969K3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 HCG4-201ENST00000418983 998 ntBASIC17.51■□□□□ 0.39
RNF34Q969K3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF34Q969K3 AL391256.1-201ENST00000443260 1855 ntBASIC17.51■□□□□ 0.39
RNF34Q969K3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF34Q969K3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF34Q969K3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF34Q969K3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF34Q969K3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF34Q969K3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.51■□□□□ 0.39
RNF34Q969K3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF34Q969K3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF34Q969K3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RNF34Q969K3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF34Q969K3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF34Q969K3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF34Q969K3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RNF34Q969K3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RNF34Q969K3 KRT19P2-202ENST00000557173 1012 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 AL031432.2-201ENST00000566714 459 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 AL928711.1-201ENST00000570165 459 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF34Q969K3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF34Q969K3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 AL513190.1-201ENST00000621254 727 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 AL645728.2-201ENST00000641974 660 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 AC092865.6-201ENST00000642101 219 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF34Q969K3 SLC22A20-204ENST00000530038 1673 ntBASIC17.5■□□□□ 0.39
RNF34Q969K3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF34Q969K3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF34Q969K3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
RNF34Q969K3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF34Q969K3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF34Q969K3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms