Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 AP002383.4-201ENST00000442518 975 ntBASIC15.42■□□□□ 0.06
HPS1Q92902 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS1Q92902 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.42■□□□□ 0.06
HPS1Q92902 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HPS1Q92902 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS1Q92902 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 KRT18P1-202ENST00000452408 1331 ntBASIC15.42■□□□□ 0.06
HPS1Q92902 SNX18-202ENST00000343017 3140 ntBASIC15.41■□□□□ 0.06
HPS1Q92902 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HPS1Q92902 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.41■□□□□ 0.06
HPS1Q92902 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 AC004870.1-201ENST00000315132 882 ntBASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-206ENST00000376090 689 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-209ENST00000376096 565 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-210ENST00000376099 610 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-214ENST00000418507 726 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.41■□□□□ 0.06
HPS1Q92902 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 AC090616.6-201ENST00000582640 721 ntBASIC15.41■□□□□ 0.06
HPS1Q92902 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.41■□□□□ 0.06
HPS1Q92902 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
HPS1Q92902 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HPS1Q92902 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 RN7SL832P-201ENST00000607781 1756 ntBASIC15.41■□□□□ 0.06
HPS1Q92902 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS1Q92902 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HPS1Q92902 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.4■□□□□ 0.06
HPS1Q92902 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 TNRC18P2-201ENST00000417666 2714 ntBASIC15.4■□□□□ 0.06
HPS1Q92902 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.4■□□□□ 0.06
HPS1Q92902 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS1Q92902 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms